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Glossary

The Genemap vocabulary, defined.

A single-page reference for the technical terms across the platform — evaluation systems, trait codes, carcass grading, production economics, statistical methods, frontier signals. Cross-country equivalents where they exist; source-article links where each term is used.

63 terms
Evaluation systems Trait codes Carcass grading Production systems Statistical methods Frontier signals Production economics

Evaluation systems.

Breed-society or national breeding-value pipelines that publish per-animal genetic evaluations. Genemap reads 21 natively via Tier 1 parsers and dispatches anything else to the AI translator.

BREEDPLAN
AU · TACE Angus AU · Hereford BREEDPLAN AU

Australia's flagship beef cattle evaluation pipeline run by AGBU at the University of New England. Computes EBVs across growth, fertility, carcass and maternal traits using a multi-trait mixed-model BLUP framework. Brand variants by breed: TACE for Angus (via Angus Australia), Hereford BREEDPLAN, Wagyu AGE, etc.

Tier 1 native parser · core/js/catalogue-parsers.js
ABCZ
BR · Sumário ABCZ · ANCP Nelore

Associação Brasileira dos Criadores de Zebu — the Brazilian breed association running the genetic evaluation pipeline for Bos indicus breeds (Nelore, Tabapuã, Guzerá, Gir, Indubrasil). Publishes DEPs (Diferenças Esperadas na Progênie).

Equivalents: EBV (AU) · EPD (US) · DEP (BR/AR/UY)
ABBA
AR · Asociación Argentina de Angus

Argentine Aberdeen Angus Association — Argentina's largest cabaña-led genetic evaluation. Publishes DEPs in Spanish-language notation (DEP P, DEP P18, DEP PV, etc.). Read via the World Angus Evaluation Tier 1 parser.

IRAC
AR · Instituto Rosario de Animales Reproductores

Argentine breed-evaluation institute covering Hereford, Brangus, Brafford and composite breeds. Sister to ABBA for non-Angus genetics.

KAPE
KR · Korea Animal Products Quality Evaluation Service

Korea's official breed-evaluation pipeline for Hanwoo (Korean native beef breed). Publishes DGVs across marbling (BMS), carcass weight, eye muscle area, backfat and growth rate.

Tier 1 parser handles Hangul column headers natively: 근내지방도 (marbling), 도체중 (carcass weight), 등심단면적 (eye muscle area).
AAA
US · American Angus Association

The largest single-breed cattle genetic database globally. Publishes EPDs for the US Angus population. Distinctive $-prefixed dollar-value indexes ($W, $F, $G, $B, $C).

$ prefix is unique to AAA — no other breed society uses it for indexes.
IGS
US · International Genetic Solutions

Multi-breed US evaluation consortium covering Simmental, Red Angus, Gelbvieh, Limousin and 12+ other breeds on a single common reference population. Publishes EPDs comparable across breeds.

AHA
US · American Hereford Association

US Hereford genetic evaluation. Distinctive $-suffixed Hereford composite indexes (CHB$ Certified Hereford Beef, BMI$ Baldy Maternal, CEZ$ Cow Energy, BII$ Brahman Influence).

ICBF
IE · Irish Cattle Breeding Federation

Ireland's national evaluation for beef and dairy. Distinctive €uro-Star indexes (€uro-Star Replacement Index, Terminal Index). One of the first European publishers of methane-efficiency EBVs.

NAV
SE · DK · NO · FI · Nordic Cattle Genetic Evaluation

Nordic four-country cattle evaluation. Publishes NTM (Nordic Total Merit Index) — a composite economic index. Klass+Vikt is the Swedish carcass-grading subsystem.

Logix Beef LRF
ZA · SA Stud Book

South African beef cattle evaluation. Covers Bonsmara, Brahman, Nguni, Drakensberger, Tuli — indigenous tropical-adapted breeds plus Bos taurus imports. Tick-resistance evaluation is a first-order axis.

Tier 1 native parser · parseLogixBeef
Sheep Genetics
AU · LAMBPLAN · MERINOSELECT

Trans-Tasman sheep genetic evaluation umbrella. LAMBPLAN covers maternal and terminal-sire breeds; MERINOSELECT covers wool-primary Merino with full fleece-trait evaluation (CFW, FD, SL, YLD).

SIL
NZ · Sheep Improvement Limited · B+L NZ Genetics

New Zealand sheep evaluation. SIL holds the pedigree-and-performance database; Beef + Lamb NZ Genetics runs the BLUP evaluation on top. Distinctive composite indexes DPL/DPR/DPC/DPP (Dual Purpose Lamb/Ram/Carcase/Plus).

Signet
GB · AHDB Beef + Lamb · BeefBreeder + Sheepbreeder

UK national beef and sheep evaluations run by AHDB. BeefBreeder publishes Beef Value (BV); Sheepbreeder focuses on terminal-sire traits (8-week and 21-week weights, MD/FD).

NSIP
US · National Sheep Improvement Program

The US sheep equivalent of NZ SIL and AU Sheep Genetics. Covers Katahdin, Dorper, Polypay, Targhee, Suffolk and Hampshire. Distinctive composite indexes USHM (US Hair Maternal) / USHT (US Hair Terminal).

Tier 1 native parser · parseNSIP
World Angus Evaluation
AU + US + CA · Multi-country Angus consortium

Cross-reference Angus genetics across the world — connects Angus DEPs/EPDs/EBVs from the three largest Angus populations into a common across-country index.

Tier 1 native parser · parseWorldAngus

Trait codes.

Per-trait breeding-value identifiers. Same biological signal, different notation across countries — the AI translator and Tier 1 parsers normalise them all to a canonical Genemap vocabulary.

EBV
Estimated Breeding Value

An estimate of an animal's full additive genetic merit for a given trait — what it transmits to all its progeny, on average. The AU/NZ standard notation.

Equivalents: EPD (US) — transmitting ability ÷ 2 · DEP (BR/AR/UY) — same arithmetic as EPD · ASBV (AU sheep)
EPD
Expected Progeny Difference

The US standard breeding-value notation. Arithmetically equivalent to ½ × EBV — represents what the animal transmits to a single progeny, on average. Half the AU EBV value for the same animal.

Equivalents: EBV (AU) · DEP (BR/AR/UY)
DEP
Diferença Esperada na Progênie (BR) · Diferencia Esperada en la Progenie (AR)

The Spanish/Portuguese equivalent of US EPD — used by Brazilian (ABCZ) and Argentine (ABBA, IRAC) breed evaluations. Arithmetically equivalent to ½ × EBV.

ASBV
Australian Sheep Breeding Value

Sheep Genetics' breeding-value notation for AU and trans-Tasman sheep evaluations. Same conceptual basis as EBV — the AU sheep adaptation.

MARB · IMF · MAR · 근내지방도
Marbling / Intramuscular Fat

A measurement of the intramuscular fat distribution in a carcass — the visual marbling that drives the high-end consumer beef premium. Scored on systems-specific scales (USDA, MSA, KAPE BMS 1-9, etc.).

Country notation: MARB (US) · IMF (AU) · MAR (BR) · BMS (KR) · 근내지방도 (KR/Hangul)
CFW
Clean Fleece Weight

Wool yield per ewe per year, measured in kg after scouring. Multiplied by the AWEX micron-to-price curve to derive wool revenue. The load-bearing economic axis for Merino wool-primary operations.

FD · Fibre Diameter
Micron

Wool fineness measured in microns (μm). The single largest fibre-quality differentiator in commercial wool. Sub-18μm Saxon Merino fleeces command exponential premiums in the AWEX auction.

NLW
Number of Lambs Weaned (per ewe joined)

The dominant economic axis for maternal sheep systems (NZ pastoral, AU maternal composite). Moving herd average from 1.45 to 1.65 lambs weaned per ewe is a ~14% revenue uplift on a roughly fixed cost base.

RFI
Residual Feed Intake

The amount an animal eats above or below what would be predicted given its size, growth rate and milk production. Low RFI = feed-efficient; high RFI = inefficient. Critical for feedlot economics and methane-intensity indirectly.

DTC · IPP
Days To Calving · Idade Primeiro Parto

Female fertility traits. DTC (Days To Calving — AU/NZ) measures how soon after joining a cow conceives. IPP (Idade Primeiro Parto — BR/AR) measures age at first calving. Both drive self-replacing herd economics through cow-cycle compression.

SC · PE365
Scrotal Circumference

Male fertility trait. Predicts age at puberty in heifer progeny. AU/NZ: SC measured at typical sale age. Brazil: PE365 measured at exactly 365 days.

EMA · REA · 등심단면적
Eye Muscle Area · Rib Eye Area

Cross-sectional area of the longissimus dorsi muscle (between 12th and 13th rib), measured in cm² or in² ultrasound or post-slaughter. Drives carcass yield grading.

Pälskvalitet
Pelt quality (Swedish · Gotland sheep)

Pelt grading axis for Swedish Gotland sheep — drives pelt-primary system economics. The pelt traits Pälskvalitet, Lockighet (curl), Lyster (lustre), Färg (colour) are uniquely Swedish Gotland evaluation axes.

WEC
Worm Egg Count · FEC (Faecal Egg Count)

Parasite-resistance trait for sheep. Lower is better. First-order economic axis for shedding sheep operations on rangeland country where drench-resistance has emerged.

CHB$ · BMI$ · CEZ$ · BII$
AHA Hereford composite indexes (US)

Certified Hereford Beef Premium ($), Baldy Maternal ($), Cow Energy Z ($), Brahman Influence ($) — Hereford-specific economic composite indexes published by the American Hereford Association.

DPL · DPR · DPC · DPP
NZ SIL composite indexes

Dual Purpose Lamb / Ram / Carcase / Plus — New Zealand sheep evaluation composite indexes. Unique to the SIL pipeline.

Carcass grading.

Country- and processor-specific grading schemes that translate carcass attributes into per-kg cwt premiums and penalties. The bioeconomic engine reads each grid to derive what every breeding value is worth on that specific market.

USDA Quality Grade
US · Prime / Choice / Select / Standard

US Department of Agriculture's carcass quality scale, driven primarily by marbling. Prime ~12% of US kill, Choice ~76%, Select ~9%. Choice/Select spread is a volatile key market signal.

EUROP × Fat class
UK · EU · Deadweight grid

The UK and EU's 5×5 carcass-grading matrix: conformation (E / U / R / O / P, best to worst) × fat class (1 / 2 / 3 / 4 / 5, low to high). UK premium target is U+×2/3 or R×3.

MSA
AU · Meat Standards Australia

Australia's eating-quality grading scheme. Combines carcass-side measurements (marbling, ossification, hump height, ultimate pH) with consumer-validated per-cut palatability models. Drives the MSA-graded premium channel for prime AU lamb and beef.

1++ A · 1++ · 1+ · 1 · 2 · 3
KR · Korean Beef Quality Grade

Korea's beef quality scale: Quality Grade (1++/1+/1/2/3 based on marbling, meat colour, fat colour, texture, maturity) × Yield Grade (A/B/C). 1++ A is the top tier (~12% of national kill, ~30% premium over 1++).

Klass + Vikt
SE · Swedish carcass-and-weight grading

Sweden's official carcass grading scheme administered by Jordbruksverket. EUROP-derived conformation classes plus weight bands. Distinctive for ungtjur (housed bull) production economics.

Cuota Hilton
EU + AR (UY/BR) · High-quality beef quota

The EU's annual high-quality beef tariff quota: 30,000 tonnes to Argentina, allocated for prime grass-fed cuts from animals 19-25 months old, ≤460 kg cwt. Drives the top-tier Argentine cabaña selection objective.

Novilho precoce
BR · Early-finished Brazilian steer

Brazilian processor-contract premium for steers finished before 24 months. R$5-15 per arroba (15 kg cwt) above the spot boi gordo indicator. Mato Grosso do Sul, Goiás and São Paulo run formal certification programs.

Native Breed premium
UK · Hereford Beef · Aberdeen Angus Beef

UK branded-beef premium tiers: Hereford Beef Premium and Certified Aberdeen Angus Beef Premium pay +£0.10 to +£0.35/kg cwt over the standard EUROP grid for animals from certified herds.

Production systems.

The 22 archetypes Genemap models with explicit multiplier-table overlays on the bioeconomic engine. See the live catalogue for every system with its full multiplier table.

Ungtjur
SE · Swedish housed-bull production

Swedish young-bull intensive housed production system. Mostly Charolais, Limousin and Holstein crosses, fed indoors to ~16 months on a TMR ration. Klass+Vikt grading, EUROP conformation premium.

Hanwoo intensive
KR · 30-month corn-and-rice-bran finish

Korean Hanwoo cattle finished intensively to ~30 months on barley + rice bran + concentrate, targeting 1++ marbling. Marbling worth ~3.5× the temperate-system default.

Cabaña
AR · UY · Argentine seedstock operation

The Spanish-language equivalent of "stud" (AU) or "seedstock operation" (US). Cabañas like La Pampa, Don Modesto run formal Aberdeen Angus and Hereford genetic evaluations through ABBA and IRAC.

Confinamento
BR · Brazilian feedlot

Brazilian-Portuguese term for cattle finishing in a feedlot. Increasingly common in Brazil for the China-export channel; still ~30% of national kill vs Cerrado pasture finish.

Pelt-primary
SE · IS · NA · Gotland · Karakul · Icelandic

Sheep production where the lamb pelt is the primary revenue source, slaughtered at 13-18 kg carcass for premium pelt curl quality. Pälskvalitet ×4, carcass dampened.

Shedding sheep
AU/NZ/UK · "shedders" · US/ZA · "hair sheep"

Sheep breeds that shed wool naturally rather than requiring shearing — Dorper, Damara, Wiltipoll, Australian White, Katahdin, St Croix. Meat-only economics. Worm-resistance (WEC) is first-order. The fastest-growing AU sheep segment.

Novilho precoce
BR · Yearling-finished steer

Brazilian production system specifically targeting the novilho precoce premium tier — steer slaughtered before 24 months. Driven by certified programs in Mato Grosso do Sul, Goiás, São Paulo.

Three-stage US chain
US · Cow-calf → backgrounder → feedyard

The US beef supply chain split across three distinct businesses: cow-calf operation sells calves at weaning; backgrounder grows them to ~750 lb; feedyard finishes to ~1,400 lb. Each link has a different bioeconomic objective.

Statistical methods.

The closed-form mathematics and statistical inference techniques underlying the bioeconomic engine and the calibration loop. Documented with citations on the methodology page.

BLUP
Best Linear Unbiased Prediction

Henderson 1975 mixed-model equations — the standard statistical framework for breeding-value estimation. Combines pedigree (relationship matrix), fixed effects (year × contemporary group), and the observed phenotype to produce a per-animal EBV.

ssGBLUP
Single-Step Genomic BLUP

Combines pedigree-based BLUP with genomic-marker information in one mixed-model framework. Aguilar 2010, VanRaden 2008. The current standard for genomic breeding-value estimation in commercial pipelines.

Ridge regression
L2-regularised linear regression

Hoerl & Kennard 1970. Used in Genemap's closed-loop calibration to regress producer-realised slaughter $/head against the animal's EBV vector. λ regularises against multicollinearity between correlated breeding values.

DGV
Direct Genomic Value

A breeding-value estimate computed directly from SNP genotypes (without pedigree). Used in per-farm GWAS where the producer's own animals' genotypes are regressed against their realised profit.

Discounted gene flow
NPV-weighted lifetime trait expression

Brascamp 1978, McClintock & Cunningham 1974. Each EBV expresses across multiple generations — directly in the animal, in daughters, in granddaughters. The platform NPV-discounts the full pathway at 5% over 10 years.

REML
Restricted Maximum Likelihood

Patterson & Thompson 1971. Standard method for estimating variance components in mixed-model breeding-value evaluation. Used to select the ridge regularisation penalty λ in Genemap's calibration loop.

Normal-Inverse-Gamma conjugate prior
NIG · CB.2 online update

A Bayesian model with closed-form posterior updates used in Genemap's online calibration. Mathematically equivalent to ridge regression with λ derived from the prior precision Λ₀.

core/js/calibration-online.js (CB.2)

Frontier signals.

Evaluation axes the platform consumes where data is available — beyond conventional EBVs/EPDs.

Methylation EBV
DNA methylation at stress-response loci

Heritable methylation patterns at known loci (HSP70, NR3C1, IGF2) carry inheritance signal independent of the underlying genome. Used by Genemap as a per-animal epigenetic stress-resilience score.

Methane EBV
Residual CH4 intensity

Heritable component of methane production per kg of dry-matter intake. h² ≈ 0.20. Published natively by NZ B+L NZ Genetics, AU BREEDPLAN pilot, IE ICBF.

Microbiome panel
16S rRNA · rumen composition

Composition of rumen and gut microbial communities — heritable component (h²≈0.20) and economically material for feed-conversion, methane production, parasite resistance.

GreenFeed
Pulse-tracker methane measurement

Commercial pulse-tracker system that measures per-animal methane emissions at known intervals when an animal visits the feeder. One of four methane-measurement methods Genemap's CH4.1 module accepts (alongside SF6, respiration chamber, microbiome proxy).

ACCU
AU · Australian Carbon Credit Unit

Australia's domestic carbon market mechanism. Methane-reduction projects can be certified to generate ACCUs under the Carbon Farming Initiative. AU ACCU spot price flows into Genemap's methane-economics layer.

EU ETS · NZ ETS · K-ETS · J-Credit
National carbon-pricing mechanisms

Each country has its own carbon market. The Genemap methane-economics layer pulls the appropriate spot price per country (EU ~$95/t, NZ ~$42, AU ~$24, KR ~$11, JP ~$31, BR ~$8) and applies it to per-animal CO₂-equivalent methane output.

Production economics.

Market-economic concepts the bioeconomic engine reads from each producer's profile and the country's daily market signals.

Gross margin per head
GM/head

The producer's net per-animal income after variable costs. The load-bearing input to Genemap's closed-form bioeconomic weight derivation. Country-specific defaults; producer's own profile inputs override.

Mercado de Liniers
AR · Buenos Aires cattle market

Historic Argentine cattle market (now operating from Cañuelas), publishing daily reference prices in ARS/kg liveweight. The platform pulls this nightly for Argentine producers' grid economics.

AWEX
AU · Australian Wool Exchange

Australian Wool Exchange weekly auction. Publishes the Eastern Market Indicator (EMI) and Western Market Indicator (WMI) per micron band — the load-bearing input to Merino wool-primary bioeconomic derivation.

MLA NLRS
AU · Meat & Livestock Australia · National Livestock Reporting Service

Australia's official daily livestock price reporting. Publishes EYCI (Eastern Young Cattle Indicator), ESTLI (Eastern States Trade Lamb Indicator), feeder steer, heavy steer, cow rates. Pulled overnight.

USDA-AMS
US · Agricultural Marketing Service

US Department of Agriculture daily carcass and feeder cattle price reports. Pulled nightly via the USDA MyMarketNews API. Drives US feedyard bioeconomic anchor.

CEPEA Boi Gordo
BR · ESALQ Boi Gordo indicator

Brazilian daily fat-steer price indicator published by the Centro de Estudos Avançados em Economia Aplicada at ESALQ-USP. The canonical Brazilian wholesale beef price.

AHDB Beef + Lamb
GB · Agriculture and Horticulture Development Board

UK national livestock-market reporting. Daily deadweight grid prices per EUROP × fat class. Drives UK terminal-sire bioeconomic anchor.

Bord Bia · IPCVA · AgriHQ · CanFax · KAPE · Jordbruksverket
National market sources (IE · AR · NZ · CA · KR · SE)

National-market price reporting equivalents per country. Each has a dedicated Genemap Edge Function pulling the daily indicator into the platform's market layer.